STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10980.1Hypothetical protein. (67 aa)    
Predicted Functional Partners:
EDP10979.1
WXG100 family type VII secretion target; Psort location: Cytoplasmic, score:8.87; Belongs to the WXG100 family.
       0.773
EDP10981.1
Hypothetical protein.
       0.773
EDP10977.1
Hypothetical protein.
       0.746
EDP10978.1
WXG100 family type VII secretion target; COG: COG4842 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.87; Belongs to the WXG100 family.
       0.746
EDP10982.1
COG: COG4495 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.87.
       0.727
EDP10976.1
FtsK/SpoIIIE family protein; KEGG: reh:H16_A1582 1.3e-08 DNA segregation ATPase FtsK/SpoIIIE related protein; COG: COG1716 FOG: FHA domain; Psort location: CytoplasmicMembrane, score:7.80.
       0.488
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.