Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDP10515.1 | EDP10516.1 | EUBDOL_01759 | EUBDOL_01760 | Polysaccharide deacetylase; KEGG: ctc:CTC00537 3.7e-31 peptidoglycan N-acetylglucosamine deacetylase K01463; COG: COG0726 Predicted xylanase/chitin deacetylase; Psort location: Cytoplasmic, score:8.87. | COG: COG3870 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.87. | 0.519 |
| EDP10516.1 | EDP10515.1 | EUBDOL_01760 | EUBDOL_01759 | COG: COG3870 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.87. | Polysaccharide deacetylase; KEGG: ctc:CTC00537 3.7e-31 peptidoglycan N-acetylglucosamine deacetylase K01463; COG: COG0726 Predicted xylanase/chitin deacetylase; Psort location: Cytoplasmic, score:8.87. | 0.519 |
| EDP10516.1 | EDP11720.1 | EUBDOL_01760 | EUBDOL_00899 | COG: COG3870 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.87. | COG: COG3870 Uncharacterized protein conserved in bacteria. | 0.537 |
| EDP10516.1 | def | EUBDOL_01760 | EUBDOL_00032 | COG: COG3870 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.87. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.553 |
| EDP10516.1 | def-2 | EUBDOL_01760 | EUBDOL_00598 | COG: COG3870 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.87. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family. | 0.553 |
| EDP11720.1 | EDP10516.1 | EUBDOL_00899 | EUBDOL_01760 | COG: COG3870 Uncharacterized protein conserved in bacteria. | COG: COG3870 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.87. | 0.537 |
| EDP11720.1 | def | EUBDOL_00899 | EUBDOL_00032 | COG: COG3870 Uncharacterized protein conserved in bacteria. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.648 |
| EDP11720.1 | def-2 | EUBDOL_00899 | EUBDOL_00598 | COG: COG3870 Uncharacterized protein conserved in bacteria. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family. | 0.594 |
| def | EDP10516.1 | EUBDOL_00032 | EUBDOL_01760 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | COG: COG3870 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.87. | 0.553 |
| def | EDP11720.1 | EUBDOL_00032 | EUBDOL_00899 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | COG: COG3870 Uncharacterized protein conserved in bacteria. | 0.648 |
| def-2 | EDP10516.1 | EUBDOL_00598 | EUBDOL_01760 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family. | COG: COG3870 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.87. | 0.553 |
| def-2 | EDP11720.1 | EUBDOL_00598 | EUBDOL_00899 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family. | COG: COG3870 Uncharacterized protein conserved in bacteria. | 0.594 |