STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10628.1Hypothetical protein; COG: COG3505 Type IV secretory pathway, VirD4 components. (72 aa)    
Predicted Functional Partners:
EDP11863.1
Hypothetical protein.
 
     0.778
EDP11071.1
Hypothetical protein.
 
     0.775
EDP10785.1
Phospholipase, patatin family; KEGG: vfi:VFA0714 4.8e-12 serine protease; COG: COG4667 Predicted esterase of the alpha-beta hydrolase superfamily; Psort location: Cytoplasmic, score:8.87.
    
   0.769
EDP11842.1
Hypothetical protein; COG: COG3451 Type IV secretory pathway, VirB4 components; Psort location: Extracellular, score:8.82.
 
  
 0.745
EDP11072.1
Hypothetical protein; COG: NOG28113 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.99.
 
     0.742
EDP11845.1
Hypothetical protein; COG: NOG28113 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.99.
 
     0.741
EDP11843.1
Hypothetical protein; COG: COG3451 Type IV secretory pathway, VirB4 components; Psort location: Cytoplasmic, score:8.87.
 
  
 0.721
EDP11075.1
Hypothetical protein; COG: COG3451 Type IV secretory pathway, VirB4 components; Psort location: Cytoplasmic, score:8.87.
 
  
 0.720
EDP12103.1
Sigma-70, region 4; Psort location: Cytoplasmic, score:8.87.
  
     0.582
EDP11866.1
Hypothetical protein.
 
     0.542
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.