STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10635.1Hypothetical protein; Psort location: Cytoplasmic, score:8.87. (158 aa)    
Predicted Functional Partners:
EDP10636.1
Glycosyltransferase, group 1 family protein; KEGG: lwe:lwe2504 4.2e-94 cpoA; glycosyl transferase; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score:8.87.
       0.535
EDP10634.1
Inositol monophosphatase family protein; KEGG: hne:HNE_0169 2.0e-05 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082; COG: COG1218 3-Phosphoadenosine 5-phosphosulfate (PAPS) 3-phosphatase; Psort location: Cytoplasmic, score:8.87.
       0.513
EDP10633.1
Hypothetical protein; KEGG: eci:UTI89_C2121 4.0e-07 fliY; cystine-binding periplasmic protein precursor K02030:K02424; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
       0.426
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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