STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10703.1KEGG: sak:SAK_0393 1.7e-23 Cof-like hydrolase/peptidyl-prolyl cis-trans isomerase domain protein; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score:8.87. (267 aa)    
Predicted Functional Partners:
EDP10493.1
KEGG: lwe:lwe2649 7.9e-29 Cof-like hydrolase K01564; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score:8.87.
 
 
 
0.611
EDP10853.1
Phosphoribulokinase/uridine kinase family protein; KEGG: ctc:CTC00344 2.1e-106 uridine kinase K00876; COG: COG0572 Uridine kinase; Psort location: Cytoplasmic, score:8.87.
  
 
  0.584
ribF
Riboflavin biosynthesis protein RibF; KEGG: bha:BH2409 2.3e-52 ribC; riboflavin kinase / FAD synthase K00861:K00953; COG: COG0196 FAD synthase; Psort location: Cytoplasmic, score:8.87; Belongs to the ribF family.
   
 0.517
EDP10796.1
KEGG: ecp:ECP_1762 2.8e-49 PTS system, mannose-specific IID component K02796; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score:10.00.
    
  0.491
EDP10819.1
Alpha amylase, catalytic domain protein; KEGG: fal:FRAAL2309 8.1e-59 cyclomaltodextrinase K01208; COG: COG0366 Glycosidases; Psort location: Cytoplasmic, score:9.98.
    
 0.474
EDP10704.1
Hypothetical protein.
       0.470
EDP10404.1
Hypothetical protein; KEGG: ftf:FTF1462c 9.4e-65 wbtC; UDP-glucose 4-epimerase K01784; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score:8.87.
   
 0.467
EDP10876.1
PAP2 family protein; KEGG: hdu:HD1199 5.0e-07 pgpB; phosphatidylglycerophosphatase B K01096; COG: COG0671 Membrane-associated phospholipid phosphatase; Psort location: CytoplasmicMembrane, score:9.99.
    
 0.464
galU
KEGG: cpe:CPE0506 2.4e-91 galF; UTP-glucose-1-phosphate uridylyltransferase K00963; COG: COG1210 UDP-glucose pyrophosphorylase; Psort location: Cytoplasmic, score:8.87.
     
 0.458
EDP11083.1
KEGG: cpr:CPR_2042 1.0e-42 glycosyl transferase, group 2 family protein K00754; COG: COG1215 Glycosyltransferases, probably involved in cell wall biogenesis; Psort location: CytoplasmicMembrane, score:9.99.
    
 0.453
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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