STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10751.1CoA transferase; KEGG: cpf:CPF_0091 7.5e-159 propionate CoA-transferase K01026; COG: COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase; Psort location: Cytoplasmic, score:8.87; Belongs to the 3-oxoacid CoA-transferase family. (510 aa)    
Predicted Functional Partners:
EDP11022.1
Rubredoxin; KEGG: fnu:FN1424 2.4e-265 acyl-CoA dehydrogenase, short-chain specific K00248; COG: COG2025 Electron transfer flavoprotein, alpha subunit; Psort location: Cytoplasmic, score:9.98.
  
 
 0.957
EDP10746.1
acyl-CoA dehydrogenase, C-terminal domain protein; KEGG: cpe:CPE2300 1.6e-140 bcd; butyryl-CoA dehydrogenase, putative K00248; COG: COG1960 Acyl-CoA dehydrogenases; Psort location: Cytoplasmic, score:8.87.
  
 
 0.945
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score:8.87.
     
 0.930
EDP10745.1
KEGG: fnu:FN0495 6.2e-139 acetyl-CoA acetyltransferase K00626; COG: COG0183 Acetyl-CoA acetyltransferase; Psort location: Cytoplasmic, score:9.98; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.923
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.912
EDP10527.1
KEGG: tde:TDE2512 2.7e-131 aldehyde dehydrogenase (NADP) family protein K00128; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: Cytoplasmic, score:9.98.
    
 0.909
pta-2
KEGG: btk:BT9727_5068 2.5e-87 pta; phosphate acetyltransferase K00625; COG: COG0280 Phosphotransacetylase; Psort location: Cytoplasmic, score:8.87.
     
 0.909
crt
3-hydroxybutyryl-CoA dehydratase; KEGG: cno:NT01CX_0474 6.4e-82 enoyl-CoA hydratase/isomerase family protein K01715; COG: COG1024 Enoyl-CoA hydratase/carnithine racemase; Psort location: Cytoplasmic, score:8.87.
    
 0.821
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
     
 0.778
EDP10749.1
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein; KEGG: fnu:FN1019 8.3e-89 3-hydroxybutyryl-CoA dehydrogenase K00074; COG: COG1250 3-hydroxyacyl-CoA dehydrogenase; Psort location: Cytoplasmic, score:8.87.
    
 0.762
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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