STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10754.1Hypothetical protein; KEGG: bcz:BCZK2057 0.00049 macrolide efflux protein K00953; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:9.99. (414 aa)    
Predicted Functional Partners:
EDP10753.1
Tetratricopeptide repeat protein; KEGG: bha:BH4014 0.00041 response regulator aspartate phosphatase K06365; COG: COG0457 FOG: TPR repeat; Psort location: Cytoplasmic, score:8.87.
 
   
 0.883
EDP11540.1
Chorismate mutase; KEGG: det:DET0461 5.9e-40 tyrA; chorismate mutase / prephenate dehydratase K04093:K04518; COG: COG0077 Prephenate dehydratase; Psort location: Cytoplasmic, score:9.98.
  
 
 0.787
EDP10752.1
Beta-eliminating lyase; KEGG: tde:TDE0005 1.3e-92 ltaE; L-threonine aldolase, low-specificity K01620; COG: COG2008 Threonine aldolase; Psort location: Cytoplasmic, score:8.87.
    
  0.741
EDP10755.1
Nitroreductase family protein; KEGG: sat:SYN_01293 3.2e-32 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase K00357; COG: COG0778 Nitroreductase; Psort location: Cytoplasmic, score:8.87.
     
 0.704
EDP11139.1
Transporter, major facilitator family protein; KEGG: psb:Psyr_2895 0.0011 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:9.99.
  
  
 0.570
EDP11760.1
Transporter, major facilitator family protein; KEGG: bcz:BCZK2057 7.8e-10 macrolide efflux protein K00953; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:9.99.
  
     0.554
EDP12264.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
  
   
 0.549
EDP10351.1
KEGG: ldb:Ldb1350 8.7e-62 homoserine dehydrogenase K00003; COG: COG0460 Homoserine dehydrogenase; Psort location: Cytoplasmic, score:8.87.
   
  0.544
EDP11789.1
Methyltransferase domain protein; KEGG: rty:RT0613 3.3e-09 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score:8.87.
  
  
 0.537
EDP11596.1
Methyltransferase domain protein; KEGG: btk:BT9727_3407 2.6e-19 possible ubiquinone/menaquinone methyltransferase K00599; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score:8.87.
    
 0.526
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.