STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10764.1Hypothetical protein; KEGG: cal:orf19.2410 3.4e-07 IMH1; involved in vesicular transport K01553; COG: COG1511 Predicted membrane protein. (624 aa)    
Predicted Functional Partners:
EDP10765.1
MMPL family protein; COG: COG1033 Predicted exporters of the RND superfamily; Psort location: CytoplasmicMembrane, score:9.99.
   
 0.995
EDP10766.1
Transcriptional regulator, TetR family; KEGG: bcl:ABC2937 0.00011 NADH dehydrogenase K03885; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.87.
 
  
 0.849
EDP10089.1
ABC-2 type transporter; COG: COG0842 ABC-type multidrug transport system, permease component; Psort location: CytoplasmicMembrane, score:9.99.
  
 
  0.538
EDP11725.1
KEGG: fal:FRAAL1877 8.7e-30 putative ABC transporter ATP-binding protein; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
    
 0.452
EDP11801.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0251 8.6e-23 ATPase; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
    
 0.452
EDP11211.1
ABC transporter, ATP-binding protein; KEGG: pmu:PM0781 3.1e-11 hexA; HexA, capsule biosynthetic locus K01990; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: Cytoplasmic, score:8.87.
    
 0.452
EDP10841.1
KEGG: afu:AF1021 3.3e-37 ABC transporter, ATP-binding protein K02017; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
    
 0.452
EDP11009.1
KEGG: hpa:HPAG1_1162 6.6e-48 ABC transporter, ATP-binding protein K06022; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
    
 0.452
bcrA
KEGG: fal:FRAAL3681 5.5e-44 putative ABC transporter ATP-binding protein; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
    
 0.452
EDP10541.1
KEGG: afu:AF1021 2.6e-30 ABC transporter, ATP-binding protein K02017; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
    
 0.452
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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