Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDP10764.1Hypothetical protein; KEGG: cal:orf19.2410 3.4e-07 IMH1; involved in vesicular transport K01553; COG: COG1511 Predicted membrane protein. (624 aa)    
Predicted Functional Partners:
EDP10765.1
MMPL family protein; COG: COG1033 Predicted exporters of the RND superfamily; Psort location: CytoplasmicMembrane, score:9.99.
   
 0.995
EDP10766.1
Transcriptional regulator, TetR family; KEGG: bcl:ABC2937 0.00011 NADH dehydrogenase K03885; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.87.
 
  
 0.847
EDP10089.1
ABC-2 type transporter; COG: COG0842 ABC-type multidrug transport system, permease component; Psort location: CytoplasmicMembrane, score:9.99.
  
 
  0.603
srtB
Sortase, SrtB family; COG: COG4509 Uncharacterized protein conserved in bacteria.
  
   
 0.413
EDP10931.1
Hypothetical protein; KEGG: pfa:PF14_0112 5.3e-05 POM1, putative K00961; COG: NOG13729 non supervised orthologous group.
  
     0.403
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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