STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10801.1Cation diffusion facilitator family transporter; KEGG: mja:MJ0449 1.7e-35 cation efflux system protein K01529; COG: COG0053 Predicted Co/Zn/Cd cation transporters; Psort location: CytoplasmicMembrane, score:9.97; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (388 aa)    
Predicted Functional Partners:
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
    0.652
EDP10800.1
COG: COG3314 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score:9.99.
       0.547
EDP12314.1
Hypothetical protein; KEGG: efa:EF0298 6.3e-23 copper-translocating P-type ATPase K01533; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score:9.82.
  
 
 0.527
EDP12295.1
Copper-exporting ATPase; KEGG: cpe:CPE0555 1.5e-206 probable copper-transporting ATPase K01533; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score:9.99.
  
 
 0.527
cadA-2
Cadmium-exporting ATPase; KEGG: btk:BT9727_0506 3.0e-203 cation-transporting ATPase, P-type; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score:9.99.
  
 
 0.527
EDP10870.1
Heavy metal-associated domain protein; KEGG: sat:SYN_01290 1.2e-09 copper-exporting ATPase K01533; COG: COG2217 Cation transport ATPase.
  
 
 0.527
EDP10799.1
Phosphogluconate dehydrogenase (decarboxylating), NAD binding domain protein; KEGG: bca:BCE_4109 3.2e-71 2-hydroxy-3-oxopropionate reductase K00042; COG: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; Psort location: Cytoplasmic, score:8.87.
       0.526
EDP10742.1
FeoA domain protein; COG: COG1918 Fe2+ transport system protein A; Psort location: Cytoplasmic, score:8.87.
     
 0.492
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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