STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10103.1KEGG: reh:H16_A1397 1.6e-60 ABC-type transporter, ATPase component; COG: COG1101 ABC-type uncharacterized transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49. (251 aa)    
Predicted Functional Partners:
EDP10104.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: msm:MSMEG_4171 2.4e-12 ribose transport system permease protein RbsC; COG: COG4120 ABC-type uncharacterized transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
    0.996
EDP10105.1
ABC transporter substrate binding protein; COG: COG2984 ABC-type uncharacterized transport system, periplasmic component; Psort location: Cytoplasmic, score:8.87.
 
    0.960
EDP12070.1
ABC transporter, ATP-binding protein; KEGG: reh:H16_B1124 4.2e-85 ABC-type transporter; COG: COG4608 ABC-type oligopeptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
 
     
0.897
EDP11423.1
ABC transporter, ATP-binding protein; KEGG: pen:PSEEN1283 1.5e-64 livG; branched-chain amino acid ABC transporter, ATP-binding protein; COG: COG0411 ABC-type branched-chain amino acid transport systems, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
 
   
0.633
EDP12351.1
KEGG: bce:BC4148 3.2e-71 artP; arginine transport ATP-binding protein artP K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
 
    
0.630
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
     
0.611
EDP12069.1
KEGG: cch:Cag_1883 4.3e-92 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02031; COG: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
 
     
0.579
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
       0.420
glgD
Glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: cpe:CPE0069 5.8e-65 glgD; glycogen biosynthesis protein K00975; COG: COG0448 ADP-glucose pyrophosphorylase; Psort location: Cytoplasmic, score:8.87.
       0.420
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
       0.420
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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