STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10105.1ABC transporter substrate binding protein; COG: COG2984 ABC-type uncharacterized transport system, periplasmic component; Psort location: Cytoplasmic, score:8.87. (339 aa)    
Predicted Functional Partners:
EDP10104.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: msm:MSMEG_4171 2.4e-12 ribose transport system permease protein RbsC; COG: COG4120 ABC-type uncharacterized transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
    0.998
EDP10103.1
KEGG: reh:H16_A1397 1.6e-60 ABC-type transporter, ATPase component; COG: COG1101 ABC-type uncharacterized transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
 
    0.960
EDP10814.1
Hypothetical protein; KEGG: ddi:DDB0167703 5.8e-09 hypothetical protein K01971; COG: COG5022 Myosin heavy chain; Psort location: Extracellular, score:7.62.
    
  0.505
EDP12366.1
Hypothetical protein; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:8.87.
    
 0.485
EDP12236.1
Hypothetical protein; COG: COG1879 ABC-type sugar transport system, periplasmic component; Psort location: Cytoplasmic, score:8.87.
    
  0.479
EDP12343.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bcz:BCZK0246 1.8e-25 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score:9.36.
  
 
 0.469
EDP10383.1
Hypothetical protein; COG: COG3177 Uncharacterized conserved protein.
  
 
  0.458
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
       0.412
glgD
Glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: cpe:CPE0069 5.8e-65 glgD; glycogen biosynthesis protein K00975; COG: COG0448 ADP-glucose pyrophosphorylase; Psort location: Cytoplasmic, score:8.87.
       0.412
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
       0.412
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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