STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10131.1Glycosyltransferase, group 2 family protein; KEGG: bcz:BCZK1105 2.1e-74 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score:8.87. (352 aa)    
Predicted Functional Partners:
EDP10132.1
Collagen triple helix repeat protein; KEGG: gga:418942 1.6e-07 LOC418942; similar to Mitochondrial intermediate peptidase K01410; COG: NOG38769 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
 
   
 0.889
EDP10218.1
GtrA-like protein; KEGG: gka:GK3365 0.00095 F0F1-type ATP synthaseI subunit K02116; COG: COG2246 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.99.
 
 
 0.604
EDP10404.1
Hypothetical protein; KEGG: ftf:FTF1462c 9.4e-65 wbtC; UDP-glucose 4-epimerase K01784; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score:8.87.
  
 0.574
EDP10220.1
Putative membrane protein; KEGG: bsu:BG10380 0.00038 comP; two-component sensor histidine kinase. potential cognate response regulator is comA K07680; COG: NOG14939 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.99.
  
 
 0.565
EDP11290.1
Collagen triple helix repeat protein; KEGG: gga:418942 8.8e-16 LOC418942; similar to Mitochondrial intermediate peptidase K01410; COG: NOG09575 non supervised orthologous group.
 
   
 0.557
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.550
EDP10625.1
Acyltransferase; COG: NOG11518 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.550
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.539
rfbB
KEGG: ljo:LJ1049 2.2e-134 dTDP-D-glucose 4,6-dehydratase K01710; COG: COG1088 dTDP-D-glucose 4,6-dehydratase; Psort location: Cytoplasmic, score:8.87; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.538
EDP11083.1
KEGG: cpr:CPR_2042 1.0e-42 glycosyl transferase, group 2 family protein K00754; COG: COG1215 Glycosyltransferases, probably involved in cell wall biogenesis; Psort location: CytoplasmicMembrane, score:9.99.
  
 0.527
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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