STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10211.1LytTr DNA-binding domain protein; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score:8.87. (234 aa)    
Predicted Functional Partners:
EDP12237.1
KEGG: ecp:ECP_2406 1.0e-31 hypothetical protein YpdA K07704; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: Cytoplasmic, score:8.87.
 
 0.925
EDP10167.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpf:CPF_0554 1.2e-82 sensor histidine kinase K07718; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
 
 0.873
EDP10212.1
Hypothetical protein; KEGG: lmf:LMOf2365_1570 2.0e-05 type IV leader peptidase family protein K02236; Psort location: CytoplasmicMembrane, score:9.99.
       0.773
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.700
EDP10126.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpe:CPE0841 3.7e-77 two-component sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:9.49.
 
 
 0.535
EDP10761.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: stl:stu1335 4.1e-55 hk07; sensor histidine kinase (homolog to HK01Spn & Sth); COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score:8.87.
 
 
 0.529
EDP10213.1
Hypothetical protein.
       0.529
gpsA
KEGG: lmf:LMOf2365_1965 5.7e-81 gpsA; glycerol-3-phosphate dehydrogenase, NAD-dependent K00057; COG: COG0240 Glycerol-3-phosphate dehydrogenase; Psort location: Cytoplasmic, score:8.87.
       0.473
EDP12283.1
KEGG: bli:BL00749 1.7e-49 cssS; two-component sensor histidine kinase K07650; COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score:9.36.
  
 
 0.471
EDP11111.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tte:TTE2688 4.1e-48 baeS12; sensory transduction histidine kinases K07652; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:9.49.
  
 
 0.471
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.