STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutCCutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family. (250 aa)    
Predicted Functional Partners:
EDP10320.1
Asparaginase; KEGG: lsa:LSA1693 6.1e-93 asnA2; L-asparaginase K01424; COG: COG1446 Asparaginase; Psort location: Cytoplasmic, score:8.87.
 
     0.893
EDP10317.1
MlrC domain protein; KEGG: reh:H16_A1780 6.3e-23 uncharacterized conserved protein containing translation initiation inhibitory endoribonuclease domain; COG: COG5476 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.87.
 
     0.854
EDP10319.1
Putative dipeptidase; KEGG: chy:CHY_2216 1.8e-57 peptidase, M20/M25/M40 family K01439; COG: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; Psort location: Cytoplasmic, score:8.87.
       0.787
nadE
NAD+ synthase; KEGG: tte:TTE0640 9.4e-49 nadE; NAD synthase K01950; COG: COG0388 Predicted amidohydrolase; Belongs to the NAD synthetase family.
   
   0.648
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
    0.643
EDP10321.1
KEGG: eca:ECA4435 1.4e-13 pts system, IIb component K02760; COG: COG1440 Phosphotransferase system cellobiose-specific component IIB.
  
    0.604
EDP11540.1
Chorismate mutase; KEGG: det:DET0461 5.9e-40 tyrA; chorismate mutase / prephenate dehydratase K04093:K04518; COG: COG0077 Prephenate dehydratase; Psort location: Cytoplasmic, score:9.98.
      
 0.510
EDP10322.1
PTS system, Lactose/Cellobiose specific IIA subunit; KEGG: cpr:CPR_2600 1.6e-21 phosphotransferase system enzyme II, PtcA K02759; COG: COG1447 Phosphotransferase system cellobiose-specific component IIA; Psort location: Cytoplasmic, score:9.98.
  
    0.495
EDP10324.1
Renal dipeptidase family protein; KEGG: ctc:CTC00571 1.1e-31 membrane dipeptidase K01273; COG: COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog; Psort location: Cytoplasmic, score:8.87.
 
   
 0.461
EDP12314.1
Hypothetical protein; KEGG: efa:EF0298 6.3e-23 copper-translocating P-type ATPase K01533; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score:9.82.
     
 0.435
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
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