STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10319.1Putative dipeptidase; KEGG: chy:CHY_2216 1.8e-57 peptidase, M20/M25/M40 family K01439; COG: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; Psort location: Cytoplasmic, score:8.87. (375 aa)    
Predicted Functional Partners:
EDP11148.1
Putative dipeptidase; KEGG: lin:lin1661 3.0e-84 similar to Xaa-His dipeptidase K01439; COG: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; Psort location: Cytoplasmic, score:8.87.
  
  
 
0.928
EDP10320.1
Asparaginase; KEGG: lsa:LSA1693 6.1e-93 asnA2; L-asparaginase K01424; COG: COG1446 Asparaginase; Psort location: Cytoplasmic, score:8.87.
 
  
 0.881
EDP11448.1
Putative dipeptidase; KEGG: lsl:LSL_0447 2.9e-61 Xaa-His dipeptidase K01270; COG: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; Psort location: Cytoplasmic, score:8.87.
  
  
 
0.801
EDP10317.1
MlrC domain protein; KEGG: reh:H16_A1780 6.3e-23 uncharacterized conserved protein containing translation initiation inhibitory endoribonuclease domain; COG: COG5476 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.87.
 
     0.799
cutC
CutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
       0.787
EDP12329.1
Aminotransferase, class I/II; KEGG: bce:BC2896 2.8e-95 aspartate aminotransferase; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score:8.87.
    
 0.760
EDP10321.1
KEGG: eca:ECA4435 1.4e-13 pts system, IIb component K02760; COG: COG1440 Phosphotransferase system cellobiose-specific component IIB.
 
     0.733
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score:8.87.
  
 
 0.701
nadE
NAD+ synthase; KEGG: tte:TTE0640 9.4e-49 nadE; NAD synthase K01950; COG: COG0388 Predicted amidohydrolase; Belongs to the NAD synthetase family.
   
 0.662
EDP10327.1
Putative licABCH operon regulator; KEGG: spb:M28_Spy1064 1.7e-38 PTS system, mannitol (cryptic)-specific IIA component K00890; COG: COG3711 Transcriptional antiterminator; Psort location: Cytoplasmic, score:8.87.
     0.631
Your Current Organism:
Absiella dolichum
NCBI taxonomy Id: 428127
Other names: A. dolichum DSM 3991, Absiella dolichum ATCC 29143, Absiella dolichum DSM 3991, Eubacterium dolichum ATCC 29143, Eubacterium dolichum DSM 3991, Eubacterium dolichum strain DSM 3991
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.