STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS61458.1PFAM: protein of unknown function DUF883 ElaB; KEGG: reu:Reut_A0125 hypothetical protein. (141 aa)    
Predicted Functional Partners:
ACS61457.1
PFAM: Ferritin Dps family protein; Rubrerythrin; KEGG: cti:RALTA_A1787 putative bacterioferritin.
  
    0.767
ACS62069.1
KEGG: rso:RSc0752 hypothetical protein.
  
  
 0.748
ACS64650.1
KEGG: cti:RALTA_B0381 hypothetical protein.
  
    0.601
ACS61459.1
PFAM: protein of unknown function DUF1328; KEGG: cak:Caul_4145 hypothetical protein.
  
    0.559
ACS62070.1
PFAM: protein of unknown function DUF883 ElaB; KEGG: rso:RSc0753 hypothetical protein.
   
  
 0.503
ACS63225.1
PFAM: Peptidoglycan-binding LysM; transport-associated; SMART: Peptidoglycan-binding LysM; KEGG: rso:RSc2148 hypothetical protein.
   
  
 0.488
ACS63783.1
PFAM: Ferritin Dps family protein; KEGG: rso:RSc2687 putative DNA protection during starvation or oxydative stress transcription regulator protein; Belongs to the Dps family.
  
    0.460
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.