STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS62219.1Transcriptional regulator, GntR family with aminotransferase domain protein; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: rso:RSc0989 putative transcription regulator protein. (517 aa)    
Predicted Functional Partners:
ACS62217.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc0987 hypothetical protein.
 
     0.745
ACS62218.1
PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: rso:RSc0988 hypothetical protein.
 
     0.632
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
   
   0.568
ACS62215.1
Putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; KEGG: rso:RSc0985 aminotransferase protein.
 
    
0.528
ACS62221.1
PFAM: Uracil-DNA glycosylase superfamily; KEGG: reh:H16_A2653 G:T/U mismatch-specific DNA glycosylase.
       0.527
ACS62216.1
PFAM: Endoribonuclease L-PSP; KEGG: rso:RSc0986 hypothetical protein.
  
    0.496
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.