STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS62306.1Hypothetical protein. (66 aa)    
Predicted Functional Partners:
ACS62307.1
Two component transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; KEGG: rso:RSc1076 two-component system response regulator transcription regulator protein.
       0.662
ACS62308.1
KEGG: rso:RSc1077 hypothetical protein.
       0.584
ACS62303.1
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RSc1073 two-component system response regulator transcription regulator protein.
       0.456
ACS62304.1
PFAM: Peptidoglycan-binding LysM; FecR protein; SMART: Peptidoglycan-binding LysM; KEGG: rso:RSc1074 signal peptide protein.
       0.456
ACS62305.1
PAS/PAC sensor signal transduction histidine kinase; PFAM: CHASE2 domain protein; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rso:RSc1075 two-component system sensor histidine kinase transcription regulator protein.
       0.456
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.