STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS62526.1TIGRFAM: dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rso:RSc1302 hypothetical protein. (576 aa)    
Predicted Functional Partners:
ACS62527.1
Cyclic nucleotide-binding protein; PFAM: Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_C0481 hypothetical protein.
  
    0.709
ACS62525.1
KEGG: rso:RSc1301 hypothetical protein.
       0.532
ACS64897.1
PFAM: beta-lactamase domain protein; KEGG: reh:H16_A0853 lactamase B.
 
   
 0.476
ACS63073.1
PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RSc1961 putative ATPase protein.
  
 
   0.468
ACS65860.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rso:RS01906 hypothetical protein.
  
     0.459
argA
Amino-acid N-acetyltransferase; KEGG: rso:RSc1250 N-acetylglutamate synthase; TIGRFAM: amino-acid N-acetyltransferase; PFAM: aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily.
  
  
 0.406
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.