STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS63150.1TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: rso:RSc2040 ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (543 aa)    
Predicted Functional Partners:
ACS63149.1
TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: rso:RSc2039 ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
ACS63147.1
KEGG: rso:RSc2037 ABC transporter ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.996
ACS63148.1
TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: rso:RSc2038 ABC transporter ATP-binding protein.
 
 
 0.995
ACS63151.1
TIGRFAM: urea ABC transporter, urea binding protein; PFAM: Extracellular ligand-binding receptor; KEGG: rso:RSc2041 putative UreA/short-chain amide-binding signal peptide protein.
 
 
 0.992
ACS65896.1
PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: rso:RS01743 amino-acid composite ATP-binding transmembrane ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.878
ureD
Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.815
ACS65088.1
PFAM: inner-membrane translocator; KEGG: cti:RALTA_B1315 branched-chain amino acid inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.798
ACS62780.1
PFAM: inner-membrane translocator; KEGG: rso:RSc1752 amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  
 0.765
ACS65165.1
PFAM: inner-membrane translocator; KEGG: rso:RS01987 amino-acid transmembrane ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.712
ACS62779.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc1753 amino-acid ATP-binding ABC transporter protein.
 
  
 0.647
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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