STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS63189.1KEGG: rso:RSc2080 hypothetical protein. (282 aa)    
Predicted Functional Partners:
ACS63187.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rso:RSc2078 RNA polymerase factor sigma-70; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.951
ACS63188.1
KEGG: rso:RSc2079 hypothetical protein.
 
     0.945
ACS62624.1
ZipA FtsZ-binding region; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.733
ACS63090.1
PFAM: Sporulation domain protein; KEGG: rso:RSc1978 hypothetical protein.
 
     0.701
ACS63114.1
KEGG: rso:RSc2001 signal peptide protein.
  
     0.700
ACS62725.1
KEGG: rso:RSc1480 lipoprotein transmembrane.
  
     0.673
cobD
Cobalamin biosynthesis protein CbiB; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
  
     0.672
ACS62286.1
PFAM: Anti sigma-E protein RseA family protein; KEGG: rso:RSc1056 putative transmembrane sigma-E factor negative regulatory transcription regulator protein.
  
     0.663
ACS61914.1
KEGG: rso:RSc0700 hypothetical protein.
  
     0.649
ACS64461.1
PFAM: ATP synthase I chain; KEGG: rso:RSc3324 hypothetical protein.
  
     0.644
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.