STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS63218.1Urate catabolism protein; KEGG: rso:RSc2120 hypothetical protein; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase. (320 aa)    
Predicted Functional Partners:
ACS63219.1
TIGRFAM: OHCU decarboxylase; KEGG: rso:RSc2121 hypothetical protein.
 
  0.999
ACS62586.1
PFAM: Asp/Glu/hydantoin racemase; KEGG: reh:H16_B2482 hydantoin racemase.
 
  
  0.951
alc
Allantoicase; KEGG: rso:RSc3274 allantoicase; TIGRFAM: allantoicase; PFAM: Allantoicase region; Belongs to the allantoicase family.
 
 
 0.941
ACS63214.1
TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: rso:RSc2116 putative transthyretin-like protein precursor; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
    0.894
ACS63213.1
PFAM: protein of unknown function DUF989; KEGG: rso:RSc2115 hypothetical protein.
 
    0.833
ACS63207.1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
   
 0.755
ACS63204.1
KEGG: rso:RSc2096 xanthine dehydrogenase subunit B; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead.
 
     0.745
ACS63203.1
TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; ferredoxin; KEGG: rso:RSc2095 putative xanthine dehydrogenase (subunit A) oxidoreductase protein.
 
     0.725
ACS63205.1
TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: rso:RSc2097 xanthine dehydrogenase protein.
 
     0.719
ACS63217.1
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rso:RSc2119 hydroxydechloroatrazine ethylaminohydrolase.
 
   
 0.717
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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