STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS63287.1PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3289 putative LPS biosynthesis-related protein. (355 aa)    
Predicted Functional Partners:
ACS63285.1
PFAM: glycosyl transferase family 2; KEGG: pna:Pnap_2052 glycosyl transferase, family 2.
 
 0.928
ACS63286.1
PFAM: O-antigen polymerase; KEGG: cti:RALTA_A2359 putative lipopolysaccharide O-antigen ligase transmembrane protein.
  
  
 0.814
ACS63284.1
PFAM: glycosyl transferase family 2; KEGG: pna:Pnap_2051 glycosyl transferase, family 2.
  
 
 0.804
ACS65297.1
KEGG: rso:RS05186 putative maltooligosyl trehalose trehalohydrolase protein; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain.
   
 0.672
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.672
ACS65646.1
KEGG: bmj:BMULJ_01535 putative transcription elongation factor.
  
     0.649
ACS65072.1
PFAM: LmbE family protein; KEGG: bph:Bphy_4725 LmbE family protein.
 
  
 0.648
ACS62222.1
KEGG: reh:H16_A2651 methyl-accepting chemotaxis protein.
  
     0.634
ACS63288.1
KEGG: rso:RSc2205 DNA polymerase III subunit alpha; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein.
 
     0.628
ACS65147.1
KEGG: bch:Bcen2424_4033 hypothetical protein.
  
     0.583
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.