STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS63291.1PFAM: flavodoxin/nitric oxide synthase; KEGG: rso:RSc2207 putative TRP repressor binding protein. (190 aa)    
Predicted Functional Partners:
ACS62948.1
TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; NADPH-dependent FMN reductase; KEGG: rso:RSc1558 TRP repressor binding protein; Belongs to the WrbA family.
  
  
 
0.924
ACS65267.1
PFAM: NAD(P)H dehydrogenase (quinone); KEGG: spe:Spro_2460 ribosyldihydronicotinamide dehydrogenase (quinone).
    
 0.912
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
ACS63431.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rso:RSc2346 putative methyltransferase protein.
     
  0.900
ACS63783.1
PFAM: Ferritin Dps family protein; KEGG: rso:RSc2687 putative DNA protection during starvation or oxydative stress transcription regulator protein; Belongs to the Dps family.
  
  
 0.591
ACS63292.1
PFAM: Pirin domain protein; KEGG: rso:RSc2208 putative pirin-like protein; Belongs to the pirin family.
       0.584
ACS61969.1
KEGG: mpt:Mpe_A2375 hypothetical protein.
   
  
 0.553
ACS63225.1
PFAM: Peptidoglycan-binding LysM; transport-associated; SMART: Peptidoglycan-binding LysM; KEGG: rso:RSc2148 hypothetical protein.
   
  
 0.527
ACS64650.1
KEGG: cti:RALTA_B0381 hypothetical protein.
   
    0.485
ACS63025.1
PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; KEGG: cti:RALTA_B0548 conserved hypothetical protein, putative PrkA serine protein kinase domain.
   
    0.456
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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