STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS63296.1PFAM: beta-lactamase domain protein; KEGG: rso:RSc2212 hypothetical protein. (271 aa)    
Predicted Functional Partners:
ACS64423.1
KEGG: rso:RSc3284 coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 0.710
ACS62095.1
TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: rso:RSc0777 hypothetical protein.
 
  
 0.703
ACS64058.1
TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: bxe:Bxe_A3521 hypothetical protein.
 
  
 0.674
ACS64844.1
PFAM: DGC domain protein; KEGG: rso:RS02298 putative lipoprotein.
  
  
 0.544
ACS63068.1
PFAM: DGC domain protein; KEGG: rso:RS02298 putative lipoprotein.
  
  
 0.542
ACS65519.1
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: rso:RSp1222 nitrite reductase NADPH large subunit.
  
  
 0.506
ACS65521.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RS03164 flavoprotein FAD oxidoreductase.
  
  
 0.506
ACS63295.1
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: rso:RSc2211 ATP-dependent RNA helicase protein; Belongs to the DEAD box helicase family.
       0.450
ACS61732.1
PFAM: OmpW family protein; KEGG: bpd:BURPS668_3797 OmpW family protein.
   
    0.442
ACS63302.1
PFAM: OmpW family protein; KEGG: bmv:BMASAVP1_A0901 OmpW family outer membrane protein.
   
    0.442
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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