STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS63848.1Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2748 transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (347 aa)    
Predicted Functional Partners:
ACS65151.1
PFAM: plasmid encoded RepA protein; KEGG: rso:RSp0001 RepA replicase protein.
  
     0.641
ACS64498.1
KEGG: rso:RSc3360 hypothetical protein.
  
     0.612
ACS63758.1
KEGG: rso:RSc2655 hypothetical protein.
  
     0.605
ACS62417.1
KEGG: rso:RSc1189 hypothetical protein.
 
     0.448
ACS63914.1
PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; KEGG: rso:RSc2808 transmembrane sensor histidine kinase transcription regulator protein.
  
   
 0.446
ACS63834.1
PFAM: response regulator receiver; KEGG: rso:RSc2734 response regulator transcription regulator protein.
  
     0.426
ACS63767.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc2665 transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.411
ACS63849.1
KEGG: reu:Reut_A2840 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.401
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.