STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS64316.1KEGG: rso:RSc3109 general secretory pathway J transmembrane protein. (240 aa)    
Predicted Functional Partners:
ACS64317.1
PFAM: General secretion pathway protein K; KEGG: rso:RSc3110 general secretory pathway K transmembrane protein.
 
 
 0.998
ACS64315.1
TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: rso:RSc3108 general secretory pathway I transmembrane protein.
 
 
 0.988
ACS64314.1
TIGRFAM: general secretion pathway protein H; KEGG: rso:RSc3107 general secretory pathway H transmembrane protein.
 
 
 0.987
ACS64313.1
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: rso:RSc3106 putative general secretion pathway G transmembrane protein.
 
 
 0.959
ACS64318.1
PFAM: General secretion pathway L; KEGG: rso:RSc3111 general secretory pathway L transmembrane protein.
 
   
 0.909
ACS64319.1
PFAM: General secretion pathway M protein; KEGG: rso:RSc3112 general secretory pathway M transmembrane protein.
 
  
 0.900
ACS64321.1
TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: rso:RSc3114 general secretory pathway D transmembrane protein.
 
  
 0.891
ACS64320.1
KEGG: rso:RSc3113 general secretory pathway N transmembrane protein.
 
   
 0.885
ACS62014.1
Tfp pilus assembly protein FimT-like protein; KEGG: xfm:Xfasm12_1769 fimbrial protein FimT.
  
 
 0.768
ACS65860.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rso:RS01906 hypothetical protein.
  
     0.734
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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