Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS64598.1 | ACS64599.1 | Rpic12D_3334 | Rpic12D_3335 | PFAM: membrane protein of unknown function; KEGG: rso:RSc0092 hypothetical protein. | KEGG: rso:RSc0091 5,10-methylenetetrahydrofolate reductase oxidoreductase protein; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.796 |
ACS64598.1 | ACS64600.1 | Rpic12D_3334 | Rpic12D_3336 | PFAM: membrane protein of unknown function; KEGG: rso:RSc0092 hypothetical protein. | PFAM: TfoX domain protein; KEGG: rso:RSc0090 hypothetical protein. | 0.667 |
ACS64598.1 | ahcY | Rpic12D_3334 | Rpic12D_3333 | PFAM: membrane protein of unknown function; KEGG: rso:RSc0092 hypothetical protein. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.676 |
ACS64599.1 | ACS64598.1 | Rpic12D_3335 | Rpic12D_3334 | KEGG: rso:RSc0091 5,10-methylenetetrahydrofolate reductase oxidoreductase protein; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | PFAM: membrane protein of unknown function; KEGG: rso:RSc0092 hypothetical protein. | 0.796 |
ACS64599.1 | ACS64600.1 | Rpic12D_3335 | Rpic12D_3336 | KEGG: rso:RSc0091 5,10-methylenetetrahydrofolate reductase oxidoreductase protein; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | PFAM: TfoX domain protein; KEGG: rso:RSc0090 hypothetical protein. | 0.685 |
ACS64599.1 | ahcY | Rpic12D_3335 | Rpic12D_3333 | KEGG: rso:RSc0091 5,10-methylenetetrahydrofolate reductase oxidoreductase protein; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.805 |
ACS64600.1 | ACS64598.1 | Rpic12D_3336 | Rpic12D_3334 | PFAM: TfoX domain protein; KEGG: rso:RSc0090 hypothetical protein. | PFAM: membrane protein of unknown function; KEGG: rso:RSc0092 hypothetical protein. | 0.667 |
ACS64600.1 | ACS64599.1 | Rpic12D_3336 | Rpic12D_3335 | PFAM: TfoX domain protein; KEGG: rso:RSc0090 hypothetical protein. | KEGG: rso:RSc0091 5,10-methylenetetrahydrofolate reductase oxidoreductase protein; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.685 |
ACS64600.1 | ahcY | Rpic12D_3336 | Rpic12D_3333 | PFAM: TfoX domain protein; KEGG: rso:RSc0090 hypothetical protein. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.518 |
ahcY | ACS64598.1 | Rpic12D_3333 | Rpic12D_3334 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | PFAM: membrane protein of unknown function; KEGG: rso:RSc0092 hypothetical protein. | 0.676 |
ahcY | ACS64599.1 | Rpic12D_3333 | Rpic12D_3335 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | KEGG: rso:RSc0091 5,10-methylenetetrahydrofolate reductase oxidoreductase protein; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.805 |
ahcY | ACS64600.1 | Rpic12D_3333 | Rpic12D_3336 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | PFAM: TfoX domain protein; KEGG: rso:RSc0090 hypothetical protein. | 0.518 |