STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS64848.1KEGG: rso:RS02303 hypothetical protein. (427 aa)    
Predicted Functional Partners:
ACS64845.1
KEGG: rso:RS02299 hypothetical protein.
 
     0.927
ACS64846.1
PFAM: peptidase U32; KEGG: rso:RS02300 hypothetical protein.
 
    0.853
ACS62490.1
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: rso:RSc1277 cytochrome c oxidase subunit II.
  
 
 0.851
ACS63400.1
PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: rso:RS02324 signal peptide protein.
  
 
 0.851
ACS64847.1
PFAM: peptidase U32; KEGG: rso:RS02301 protease protein.
 
    0.819
ACS64844.1
PFAM: DGC domain protein; KEGG: rso:RS02298 putative lipoprotein.
 
    0.743
ACS62491.1
KEGG: rso:RSc1278 putative signal peptide protein.
  
  
 0.738
ACS63069.1
KEGG: rso:RS02299 hypothetical protein.
 
     0.692
ACS65377.1
Nitrite reductase, copper-containing; KEGG: rso:RS03038 major anaerobically induced outer membrane transmembrane protein; TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase type 3; blue (type 1) copper domain protein; multicopper oxidase type 2; cytochrome c class I.
  
 
 0.660
ACS64424.1
PFAM: Extracellular ligand-binding receptor; KEGG: rso:RSc3285 putative Leu/Ile/Val-binding signal peptide protein.
  
     0.632
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.