STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS64926.1PFAM: OsmC family protein; KEGG: rru:Rru_A0476 OsmC-like protein. (140 aa)    
Predicted Functional Partners:
ACS64927.1
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RS00814 putative transcription regulator protein.
  
 0.731
ACS64928.1
PFAM: glycosyl transferase family 2; KEGG: rso:RS00815 hypothetical protein.
       0.581
ACS63783.1
PFAM: Ferritin Dps family protein; KEGG: rso:RSc2687 putative DNA protection during starvation or oxydative stress transcription regulator protein; Belongs to the Dps family.
  
  
 0.518
ACS64923.1
PFAM: WbqC-like family protein; KEGG: azc:AZC_3473 hypothetical protein.
     
 0.492
fliE-2
TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: rso:RSp0389 flagellar hook-basal body protein FliE.
       0.481
ACS64916.1
TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cti:RALTA_B2136 glucose-1-phosphate cytidylyltransferase (CDP-glucose pyrophosphorylase).
       0.451
ACS64917.1
TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; KEGG: cti:RALTA_B2137 CDP-glucose 4,6-dehydratase.
       0.451
ACS64918.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
       0.451
ACS64919.1
Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rlt:Rleg2_4213 glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family.
       0.451
ACS64920.1
PFAM: Phytanoyl-CoA dioxygenase; KEGG: azc:AZC_3474 putative phytanoil-CoA alpha hydroxylase.
       0.451
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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