STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS65597.1PFAM: Flp/Fap pilin component; KEGG: rso:RS02598 putative pilin protein. (59 aa)    
Predicted Functional Partners:
ACS65598.1
PFAM: peptidase A24A prepilin type IV; KEGG: rso:RSp1091 prepilin peptidase transmembrane protein.
 
  
 0.929
ACS65600.1
TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rso:RS02596 signal peptide protein.
 
  
 0.882
ACS65602.1
KEGG: rso:RSp1086 pilus assembly protein.
 
  
 0.867
ACS65599.1
PFAM: TadE family protein; KEGG: rso:RS02595 hypothetical protein.
 
  
 0.853
ACS61854.1
TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rso:RSc0656 pilus assembly transmembrane protein.
 
  
 0.842
ACS65604.1
PFAM: type II secretion system protein; KEGG: rso:RS02591 pilus assembly transmembrane protein.
 
  
 0.825
ACS65601.1
PFAM: type II and III secretion system protein; KEGG: rso:RS02594 outer membrane channel signal peptide protein; Belongs to the bacterial secretin family.
 
  
 0.816
ACS65605.1
PFAM: type II secretion system protein; KEGG: rso:RS02590 putative tight adherence TadC related transmembrane protein.
 
  
 0.779
ACS65603.1
PFAM: type II secretion system protein E; KEGG: rso:RSp1085 secretion ATPase protein.
 
  
 0.749
ACS61851.1
Response regulator receiver protein; KEGG: rso:RSc0653 putative pilus assembly protein.
 
  
 0.745
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.