Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACS61597.1 | ACS62130.1 | Rpic12D_0290 | Rpic12D_0829 | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein. | 0.418 |
| ACS61597.1 | ACS65139.1 | Rpic12D_0290 | Rpic12D_3882 | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.908 |
| ACS61597.1 | ACS65178.1 | Rpic12D_0290 | Rpic12D_3921 | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein. | 0.418 |
| ACS61597.1 | ACS65609.1 | Rpic12D_0290 | Rpic12D_4366 | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RS02586 sigma-54 interacting transcription regulator protein. | 0.786 |
| ACS62130.1 | ACS61597.1 | Rpic12D_0829 | Rpic12D_0290 | Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein. | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.418 |
| ACS62130.1 | ACS65139.1 | Rpic12D_0829 | Rpic12D_3882 | Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein. | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.418 |
| ACS62130.1 | ACS65178.1 | Rpic12D_0829 | Rpic12D_3921 | Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein. | Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein. | 0.999 |
| ACS62130.1 | ACS65609.1 | Rpic12D_0829 | Rpic12D_4366 | Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein. | Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RS02586 sigma-54 interacting transcription regulator protein. | 0.618 |
| ACS65139.1 | ACS61597.1 | Rpic12D_3882 | Rpic12D_0290 | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.908 |
| ACS65139.1 | ACS62130.1 | Rpic12D_3882 | Rpic12D_0829 | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein. | 0.418 |
| ACS65139.1 | ACS65178.1 | Rpic12D_3882 | Rpic12D_3921 | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein. | 0.418 |
| ACS65139.1 | ACS65609.1 | Rpic12D_3882 | Rpic12D_4366 | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RS02586 sigma-54 interacting transcription regulator protein. | 0.786 |
| ACS65178.1 | ACS61597.1 | Rpic12D_3921 | Rpic12D_0290 | Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein. | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.418 |
| ACS65178.1 | ACS62130.1 | Rpic12D_3921 | Rpic12D_0829 | Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein. | Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein. | 0.999 |
| ACS65178.1 | ACS65139.1 | Rpic12D_3921 | Rpic12D_3882 | Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein. | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.418 |
| ACS65178.1 | ACS65609.1 | Rpic12D_3921 | Rpic12D_4366 | Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein. | Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RS02586 sigma-54 interacting transcription regulator protein. | 0.618 |
| ACS65600.1 | ACS65602.1 | Rpic12D_4357 | Rpic12D_4359 | TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rso:RS02596 signal peptide protein. | KEGG: rso:RSp1086 pilus assembly protein. | 0.981 |
| ACS65600.1 | ACS65604.1 | Rpic12D_4357 | Rpic12D_4361 | TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rso:RS02596 signal peptide protein. | PFAM: type II secretion system protein; KEGG: rso:RS02591 pilus assembly transmembrane protein. | 0.980 |
| ACS65600.1 | ACS65605.1 | Rpic12D_4357 | Rpic12D_4362 | TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rso:RS02596 signal peptide protein. | PFAM: type II secretion system protein; KEGG: rso:RS02590 putative tight adherence TadC related transmembrane protein. | 0.977 |
| ACS65600.1 | ACS65606.1 | Rpic12D_4357 | Rpic12D_4363 | TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rso:RS02596 signal peptide protein. | PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rso:RS02589 lipoprotein transmembrane. | 0.958 |
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