Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS61617.1 | ACS65735.1 | Rpic12D_0311 | Rpic12D_4493 | PFAM: cytochrome c biogenesis protein transmembrane region; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pol:Bpro_0539 cytochrome c biogenesis protein, transmembrane region. | KEGG: bur:Bcep18194_C6587 hypothetical protein. | 0.463 |
ACS63445.1 | ACS65735.1 | Rpic12D_2171 | Rpic12D_4493 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: rso:RSc2361 RNA polymerase sigma-E factor sigma-24 homolog transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily. | KEGG: bur:Bcep18194_C6587 hypothetical protein. | 0.634 |
ACS65735.1 | ACS61617.1 | Rpic12D_4493 | Rpic12D_0311 | KEGG: bur:Bcep18194_C6587 hypothetical protein. | PFAM: cytochrome c biogenesis protein transmembrane region; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pol:Bpro_0539 cytochrome c biogenesis protein, transmembrane region. | 0.463 |
ACS65735.1 | ACS63445.1 | Rpic12D_4493 | Rpic12D_2171 | KEGG: bur:Bcep18194_C6587 hypothetical protein. | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: rso:RSc2361 RNA polymerase sigma-E factor sigma-24 homolog transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily. | 0.634 |
ACS65735.1 | ACS65736.1 | Rpic12D_4493 | Rpic12D_4494 | KEGG: bur:Bcep18194_C6587 hypothetical protein. | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bur:Bcep18194_C6588 sigma-24 (FecI-like); Belongs to the sigma-70 factor family. ECF subfamily. | 0.927 |
ACS65735.1 | ACS65737.1 | Rpic12D_4493 | Rpic12D_4495 | KEGG: bur:Bcep18194_C6587 hypothetical protein. | PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; KEGG: aav:Aave_3256 beta-Ig-H3/fasciclin. | 0.703 |
ACS65736.1 | ACS65735.1 | Rpic12D_4494 | Rpic12D_4493 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bur:Bcep18194_C6588 sigma-24 (FecI-like); Belongs to the sigma-70 factor family. ECF subfamily. | KEGG: bur:Bcep18194_C6587 hypothetical protein. | 0.927 |
ACS65736.1 | ACS65737.1 | Rpic12D_4494 | Rpic12D_4495 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bur:Bcep18194_C6588 sigma-24 (FecI-like); Belongs to the sigma-70 factor family. ECF subfamily. | PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; KEGG: aav:Aave_3256 beta-Ig-H3/fasciclin. | 0.707 |
ACS65737.1 | ACS65735.1 | Rpic12D_4495 | Rpic12D_4493 | PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; KEGG: aav:Aave_3256 beta-Ig-H3/fasciclin. | KEGG: bur:Bcep18194_C6587 hypothetical protein. | 0.703 |
ACS65737.1 | ACS65736.1 | Rpic12D_4495 | Rpic12D_4494 | PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; KEGG: aav:Aave_3256 beta-Ig-H3/fasciclin. | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bur:Bcep18194_C6588 sigma-24 (FecI-like); Belongs to the sigma-70 factor family. ECF subfamily. | 0.707 |