STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS65781.1PFAM: protein of unknown function DUF187; KEGG: bvi:Bcep1808_6307 hypothetical protein. (427 aa)    
Predicted Functional Partners:
ACS65780.1
PFAM: conserved hypothetical protein; beta-lactamase; KEGG: bte:BTH_II0925 beta-lactamase, putative.
       0.847
ACS65782.1
PFAM: polysaccharide deacetylase; KEGG: bac:BamMC406_6214 polysaccharide deacetylase.
       0.800
ACS65783.1
PFAM: Rhomboid family protein; KEGG: rso:RS02331 hypothetical protein.
       0.616
ACS65784.1
PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding class 1; KEGG: mca:MCA1213 hypothetical protein.
       0.430
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.