STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS65840.1KEGG: rso:RS01894 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein. (670 aa)    
Predicted Functional Partners:
ACS62130.1
Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein.
 
  
 0.932
ACS65178.1
Hpt sensor hybrid histidine kinase; KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein.
 
  
 0.932
ACS62751.1
PFAM: type IV pilus assembly PilZ; KEGG: rso:RSc1786 putative type 4 fimbrial biogenesis protein.
    
   0.923
ACS65484.1
Diguanylate cyclase with GAF sensor; KEGG: pen:PSEEN2246 diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein.
  
 0.902
ACS65312.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: rso:RS03712 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein; PAS domain containing protein.
 
 
0.837
ACS61801.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); KEGG: rso:RSc0588 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS domain containing protein.
 
 
0.830
ACS64280.1
KEGG: rso:RSc3079 composite two component sensor histidine kinase and response regulator hybrid transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; extracellular solute-binding protein family 3; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; extracellular solute-binding protein family 3; PAC repeat-containing protein; PAS d [...]
 
 0.788
ACS65841.1
KEGG: rso:RS01895 putative transmembrane protein.
       0.780
ACS65842.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RS01896 TonB-dependent receptor signal peptide protein.
       0.779
ACS65570.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); KEGG: rso:RS05432 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein.
 
 
0.765
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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