node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCU35197.1 | SCU35213.1 | SAMEA3109314_01473 | SAMEA3109314_01474 | Putative ribosomal protein. | Nucleic-acid-binding protein. | 0.983 |
SCU35197.1 | infB | SAMEA3109314_01473 | SAMEA3109314_01472 | Putative ribosomal protein. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.992 |
SCU35197.1 | nusA | SAMEA3109314_01473 | SAMEA3109314_01475 | Putative ribosomal protein. | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 0.970 |
SCU35197.1 | rbfA | SAMEA3109314_01473 | SAMEA3109314_01460 | Putative ribosomal protein. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.573 |
SCU35197.1 | rimP | SAMEA3109314_01473 | SAMEA3109314_01476 | Putative ribosomal protein. | Transcription termination protein NusA-like protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.956 |
SCU35197.1 | rpsB | SAMEA3109314_01473 | SAMEA3109314_01486 | Putative ribosomal protein. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.985 |
SCU35197.1 | rpsG | SAMEA3109314_01473 | SAMEA3109314_01007 | Putative ribosomal protein. | 30S ribosomalprotein S7p (S5e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.983 |
SCU35197.1 | rpsJ | SAMEA3109314_01473 | SAMEA3109314_00697 | Putative ribosomal protein. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.983 |
SCU35197.1 | rpsL | SAMEA3109314_01473 | SAMEA3109314_01008 | Putative ribosomal protein. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.983 |
SCU35197.1 | uppS | SAMEA3109314_01473 | SAMEA3109314_01482 | Putative ribosomal protein. | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.640 |
SCU35213.1 | SCU35197.1 | SAMEA3109314_01474 | SAMEA3109314_01473 | Nucleic-acid-binding protein. | Putative ribosomal protein. | 0.983 |
SCU35213.1 | infB | SAMEA3109314_01474 | SAMEA3109314_01472 | Nucleic-acid-binding protein. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.966 |
SCU35213.1 | nusA | SAMEA3109314_01474 | SAMEA3109314_01475 | Nucleic-acid-binding protein. | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 0.973 |
SCU35213.1 | rbfA | SAMEA3109314_01474 | SAMEA3109314_01460 | Nucleic-acid-binding protein. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.689 |
SCU35213.1 | rimP | SAMEA3109314_01474 | SAMEA3109314_01476 | Nucleic-acid-binding protein. | Transcription termination protein NusA-like protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.960 |
SCU35213.1 | rpsB | SAMEA3109314_01474 | SAMEA3109314_01486 | Nucleic-acid-binding protein. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.457 |
SCU35213.1 | rpsL | SAMEA3109314_01474 | SAMEA3109314_01008 | Nucleic-acid-binding protein. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.641 |
SCU35213.1 | uppS | SAMEA3109314_01474 | SAMEA3109314_01482 | Nucleic-acid-binding protein. | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.660 |
infB | SCU35197.1 | SAMEA3109314_01472 | SAMEA3109314_01473 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Putative ribosomal protein. | 0.992 |
infB | SCU35213.1 | SAMEA3109314_01472 | SAMEA3109314_01474 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Nucleic-acid-binding protein. | 0.966 |