STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppFOligopeptide transport system ATP-binding protein OppF; Belongs to the ABC transporter superfamily. (321 aa)    
Predicted Functional Partners:
oppC
Oligopeptide transport system permease protein oppC.
 
 0.999
oppB
Oligopeptide transport system permease.
 
 0.999
gsiA_2
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.997
oppA_2
Putative peptide binding protein OppA.
 
 
 0.963
oppA_1
Oligopeptide ABC transporter periplasmic oligopeptide-binding protein.
 
 
 0.962
oppA_4
Oligopeptide ABC transporter periplasmic oligopeptide-binding protein.
 
 
 0.944
SCU18420.1
Nickel ABC transporter, permease subunit NikB.
 
 
 0.934
oppA_3
Putative peptide binding protein OppA.
 
 
 0.930
gsiD
Glutathione transport system permease protein gsiD.
 
 
 0.917
oppA_5
Peptide ABC transporter substrate-binding protein.
 
 
 0.887
Your Current Organism:
Staphylococcus lentus
NCBI taxonomy Id: 42858
Other names: ATCC 29070, CCUG 15599, CIP 81.63, DSM 20352, NCTC 12102, NRRL B-14758, S. lentus, Staphylococcus sciuri subsp. lentus, strain Roguinsky K21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.