STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCU45343.1Putative manganese-dependent inorganic pyrophosphatase. (212 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.810
metH
Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein.
    
 0.805
ebpS
Elastin-binding protein EbpS.
       0.726
opuCC_3
Glycine betaine/carnitine/choline transport system permease protein.
    
  0.711
SCU09114.1
GNAT family acetyltransferase.
  
     0.656
SCT84904.1
Hypoxic response protein 1.
  
   
 0.622
SCU23265.1
Uncharacterised protein.
  
     0.605
SCU23250.1
ABC-2 transporter family protein.
  
     0.597
guaB_2
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.545
SCU45349.1
Putative pyridine nucleotide-disulfide reductase.
       0.540
Your Current Organism:
Staphylococcus lentus
NCBI taxonomy Id: 42858
Other names: ATCC 29070, CCUG 15599, CIP 81.63, DSM 20352, NCTC 12102, NRRL B-14758, S. lentus, Staphylococcus sciuri subsp. lentus, strain Roguinsky K21
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