Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
caaD | cbaB | SAMEA3109314_02492 | SAMEA3109314_02224 | Cytochrome c oxidase subunit 4B. | Cytochrome c oxidase subunit 2. | 0.988 |
caaD | cccA_1 | SAMEA3109314_02492 | SAMEA3109314_02040 | Cytochrome c oxidase subunit 4B. | Cytochrome c551. | 0.859 |
caaD | ctaB | SAMEA3109314_02492 | SAMEA3109314_02496 | Cytochrome c oxidase subunit 4B. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | 0.981 |
caaD | ctaC | SAMEA3109314_02492 | SAMEA3109314_02495 | Cytochrome c oxidase subunit 4B. | Quinol oxidase polypeptide II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.998 |
caaD | qcrB | SAMEA3109314_02492 | SAMEA3109314_02039 | Cytochrome c oxidase subunit 4B. | Menaquinol-cytochrome c reductase cytochrome b subunit. | 0.609 |
caaD | qoxA | SAMEA3109314_02492 | SAMEA3109314_02181 | Cytochrome c oxidase subunit 4B. | Quinol oxidase polypeptide II; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. | 0.946 |
caaD | qoxB_1 | SAMEA3109314_02492 | SAMEA3109314_02180 | Cytochrome c oxidase subunit 4B. | Quinol oxidase polypeptide I QoxB; Belongs to the heme-copper respiratory oxidase family. | 0.965 |
caaD | qoxC_1 | SAMEA3109314_02492 | SAMEA3109314_02179 | Cytochrome c oxidase subunit 4B. | Quinol oxidase subunit III. | 0.979 |
caaD | qoxC_2 | SAMEA3109314_02492 | SAMEA3109314_02493 | Cytochrome c oxidase subunit 4B. | Quinol oxidase subunit III. | 0.998 |
cbaB | caaD | SAMEA3109314_02224 | SAMEA3109314_02492 | Cytochrome c oxidase subunit 2. | Cytochrome c oxidase subunit 4B. | 0.988 |
cbaB | cccA_1 | SAMEA3109314_02224 | SAMEA3109314_02040 | Cytochrome c oxidase subunit 2. | Cytochrome c551. | 0.999 |
cbaB | ctaB | SAMEA3109314_02224 | SAMEA3109314_02496 | Cytochrome c oxidase subunit 2. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | 0.953 |
cbaB | ctaC | SAMEA3109314_02224 | SAMEA3109314_02495 | Cytochrome c oxidase subunit 2. | Quinol oxidase polypeptide II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.980 |
cbaB | qcrB | SAMEA3109314_02224 | SAMEA3109314_02039 | Cytochrome c oxidase subunit 2. | Menaquinol-cytochrome c reductase cytochrome b subunit. | 0.927 |
cbaB | qoxB_1 | SAMEA3109314_02224 | SAMEA3109314_02180 | Cytochrome c oxidase subunit 2. | Quinol oxidase polypeptide I QoxB; Belongs to the heme-copper respiratory oxidase family. | 0.936 |
cbaB | qoxC_1 | SAMEA3109314_02224 | SAMEA3109314_02179 | Cytochrome c oxidase subunit 2. | Quinol oxidase subunit III. | 0.969 |
cbaB | qoxC_2 | SAMEA3109314_02224 | SAMEA3109314_02493 | Cytochrome c oxidase subunit 2. | Quinol oxidase subunit III. | 0.988 |
cbaB | qoxD | SAMEA3109314_02224 | SAMEA3109314_02178 | Cytochrome c oxidase subunit 2. | Putative quinol oxidase polypeptide IV. | 0.959 |
cccA_1 | caaD | SAMEA3109314_02040 | SAMEA3109314_02492 | Cytochrome c551. | Cytochrome c oxidase subunit 4B. | 0.859 |
cccA_1 | cbaB | SAMEA3109314_02040 | SAMEA3109314_02224 | Cytochrome c551. | Cytochrome c oxidase subunit 2. | 0.999 |
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