Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCU37325.1 | SCU52133.1 | SAMEA3109314_01562 | SAMEA3109314_02610 | Sortase. | Putative DUF2129-containing protein. | 0.449 |
SCU37325.1 | rpoE | SAMEA3109314_01562 | SAMEA3109314_00603 | Sortase. | DNA-directed RNA polymerase delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.516 |
SCU38494.1 | SCU52133.1 | SAMEA3109314_01613 | SAMEA3109314_02610 | Esterase. | Putative DUF2129-containing protein. | 0.447 |
SCU52133.1 | SCU37325.1 | SAMEA3109314_02610 | SAMEA3109314_01562 | Putative DUF2129-containing protein. | Sortase. | 0.449 |
SCU52133.1 | SCU38494.1 | SAMEA3109314_02610 | SAMEA3109314_01613 | Putative DUF2129-containing protein. | Esterase. | 0.447 |
SCU52133.1 | glnR | SAMEA3109314_02610 | SAMEA3109314_01403 | Putative DUF2129-containing protein. | Glutamine synthetase repressor. | 0.467 |
SCU52133.1 | rpoE | SAMEA3109314_02610 | SAMEA3109314_00603 | Putative DUF2129-containing protein. | DNA-directed RNA polymerase delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.409 |
SCU52133.1 | ugpQ_3 | SAMEA3109314_02610 | SAMEA3109314_02611 | Putative DUF2129-containing protein. | Glycerophosphoryl diester phosphodiesterase. | 0.820 |
glnR | SCU52133.1 | SAMEA3109314_01403 | SAMEA3109314_02610 | Glutamine synthetase repressor. | Putative DUF2129-containing protein. | 0.467 |
rpoE | SCU37325.1 | SAMEA3109314_00603 | SAMEA3109314_01562 | DNA-directed RNA polymerase delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | Sortase. | 0.516 |
rpoE | SCU52133.1 | SAMEA3109314_00603 | SAMEA3109314_02610 | DNA-directed RNA polymerase delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | Putative DUF2129-containing protein. | 0.409 |
ugpQ_3 | SCU52133.1 | SAMEA3109314_02611 | SAMEA3109314_02610 | Glycerophosphoryl diester phosphodiesterase. | Putative DUF2129-containing protein. | 0.820 |