STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLJ86006.1Hypothetical protein. (240 aa)    
Predicted Functional Partners:
SLJ86007.1
Adenylate and Guanylate cyclase catalytic domain-containing protein.
       0.791
SLJ86005.1
Cyclic nucleotide-binding domain-containing protein.
       0.749
SLJ86004.1
Adenylate cyclase, class 3.
       0.686
SLJ86008.1
Hypothetical protein.
       0.613
SLJ86009.1
Helix-turn-helix domain-containing protein.
       0.452
SLJ86010.1
Protein of unknown function.
       0.452
Your Current Organism:
Novosphingobium mathurense
NCBI taxonomy Id: 428990
Other names: CCM 7473, MTCC 9020, N. mathurense, Novosphingobium mathurense Gupta et al. 2009, Novosphingobium sp. SM117, strain SM117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.