STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLJ87391.1Uncharacterized conserved protein. (144 aa)    
Predicted Functional Partners:
SLJ87394.1
Lysophospholipase, alpha-beta hydrolase superfamily.
       0.789
SLJ87303.1
Uncharacterized conserved protein.
  
     0.770
SLJ88066.1
Uncharacterized conserved protein.
 
     0.769
SLJ87388.1
Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.613
SLJ97327.1
Alcohol dehydrogenase (cytochrome c)/quinohemoprotein ethanol dehydrogenase.
     
 0.602
SLK10158.1
Quinohemoprotein ethanol dehydrogenase.
     
 0.602
SLJ96461.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.572
SLK10353.1
Aryl-alcohol dehydrogenase.
    
 0.572
SLJ87387.1
Protein of unknown function.
 
     0.524
SLJ87399.1
Peptidyl-dipeptidase A.
       0.514
Your Current Organism:
Novosphingobium mathurense
NCBI taxonomy Id: 428990
Other names: CCM 7473, MTCC 9020, N. mathurense, Novosphingobium mathurense Gupta et al. 2009, Novosphingobium sp. SM117, strain SM117
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