Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SLJ89328.1 | SLJ89332.1 | SAMN06295987_101979 | SAMN06295987_101980 | Hypothetical protein. | Transcriptional regulator, PadR family. | 0.811 |
SLJ89328.1 | SLJ89335.1 | SAMN06295987_101979 | SAMN06295987_101981 | Hypothetical protein. | ATP-dependent DNA helicase DinG. | 0.525 |
SLJ89328.1 | SLJ89340.1 | SAMN06295987_101979 | SAMN06295987_101982 | Hypothetical protein. | Phosphohistidine phosphatase. | 0.489 |
SLJ89332.1 | SLJ89328.1 | SAMN06295987_101980 | SAMN06295987_101979 | Transcriptional regulator, PadR family. | Hypothetical protein. | 0.811 |
SLJ89332.1 | SLJ89335.1 | SAMN06295987_101980 | SAMN06295987_101981 | Transcriptional regulator, PadR family. | ATP-dependent DNA helicase DinG. | 0.525 |
SLJ89332.1 | SLJ89340.1 | SAMN06295987_101980 | SAMN06295987_101982 | Transcriptional regulator, PadR family. | Phosphohistidine phosphatase. | 0.489 |
SLJ89332.1 | SLJ99884.1 | SAMN06295987_101980 | SAMN06295987_103189 | Transcriptional regulator, PadR family. | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | 0.486 |
SLJ89332.1 | SLK05635.1 | SAMN06295987_101980 | SAMN06295987_105209 | Transcriptional regulator, PadR family. | Phosphinothricin acetyltransferase. | 0.453 |
SLJ89332.1 | cpdA | SAMN06295987_101980 | SAMN06295987_103242 | Transcriptional regulator, PadR family. | Calcineurin-like phosphoesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. | 0.412 |
SLJ89335.1 | SLJ89328.1 | SAMN06295987_101981 | SAMN06295987_101979 | ATP-dependent DNA helicase DinG. | Hypothetical protein. | 0.525 |
SLJ89335.1 | SLJ89332.1 | SAMN06295987_101981 | SAMN06295987_101980 | ATP-dependent DNA helicase DinG. | Transcriptional regulator, PadR family. | 0.525 |
SLJ89335.1 | SLJ89340.1 | SAMN06295987_101981 | SAMN06295987_101982 | ATP-dependent DNA helicase DinG. | Phosphohistidine phosphatase. | 0.858 |
SLJ89340.1 | SLJ89328.1 | SAMN06295987_101982 | SAMN06295987_101979 | Phosphohistidine phosphatase. | Hypothetical protein. | 0.489 |
SLJ89340.1 | SLJ89332.1 | SAMN06295987_101982 | SAMN06295987_101980 | Phosphohistidine phosphatase. | Transcriptional regulator, PadR family. | 0.489 |
SLJ89340.1 | SLJ89335.1 | SAMN06295987_101982 | SAMN06295987_101981 | Phosphohistidine phosphatase. | ATP-dependent DNA helicase DinG. | 0.858 |
SLJ99884.1 | SLJ89332.1 | SAMN06295987_103189 | SAMN06295987_101980 | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | Transcriptional regulator, PadR family. | 0.486 |
SLK05635.1 | SLJ89332.1 | SAMN06295987_105209 | SAMN06295987_101980 | Phosphinothricin acetyltransferase. | Transcriptional regulator, PadR family. | 0.453 |
cpdA | SLJ89332.1 | SAMN06295987_103242 | SAMN06295987_101980 | Calcineurin-like phosphoesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. | Transcriptional regulator, PadR family. | 0.412 |