STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLJ94509.1Signal transduction histidine kinase. (474 aa)    
Predicted Functional Partners:
SLJ86304.1
PAS domain S-box-containing protein.
 
0.992
SLJ88642.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.981
SLJ94514.1
Two component transcriptional regulator, winged helix family.
 
  0.975
SLJ86944.1
Hypothetical protein.
   
 0.973
SLJ86269.1
PAS/PAC sensor signal transduction histidine kinase.
 
 
0.956
SLJ90069.1
PAS domain S-box-containing protein.
 
 
0.954
SLJ91009.1
Multi-sensor hybrid histidine kinase.
 
 
 0.908
SLK01021.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.902
SLJ86294.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.896
SLK10673.1
Two-component system, OmpR family, response regulator.
 
  0.895
Your Current Organism:
Novosphingobium mathurense
NCBI taxonomy Id: 428990
Other names: CCM 7473, MTCC 9020, N. mathurense, Novosphingobium mathurense Gupta et al. 2009, Novosphingobium sp. SM117, strain SM117
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