STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLJ94770.1Hypothetical protein. (57 aa)    
Predicted Functional Partners:
SLJ94757.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
       0.514
SLJ94762.1
5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.
       0.514
SLJ94766.1
Transcriptional regulator, ArsR family.
       0.514
SLJ94750.1
Ribosomal protein S18 acetylase RimI.
       0.483
SLJ94745.1
Methionine synthase (B12-dependent).
       0.463
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
       0.455
Your Current Organism:
Novosphingobium mathurense
NCBI taxonomy Id: 428990
Other names: CCM 7473, MTCC 9020, N. mathurense, Novosphingobium mathurense Gupta et al. 2009, Novosphingobium sp. SM117, strain SM117
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.