STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLJ96444.1Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (392 aa)    
Predicted Functional Partners:
SLJ96439.1
Outer membrane protein, multidrug efflux system.
 
  0.984
SLJ96440.1
Hydrophobic/amphiphilic exporter-1, HAE1 family/multidrug efflux pump.
  0.978
SLJ89877.1
Multidrug efflux pump.
  0.968
SLJ89879.1
Outer membrane protein, multidrug efflux system.
 
  0.933
SLJ88898.1
Multidrug efflux pump.
  0.931
SLK01054.1
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
  0.927
SLJ88904.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
  0.898
SLJ93151.1
Outer membrane protein.
 
 0.876
SLJ95906.1
Outer membrane protein/outer membrane protein, S-layer protein transport system.
 
 0.864
SLJ88650.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
  
  0.802
Your Current Organism:
Novosphingobium mathurense
NCBI taxonomy Id: 428990
Other names: CCM 7473, MTCC 9020, N. mathurense, Novosphingobium mathurense Gupta et al. 2009, Novosphingobium sp. SM117, strain SM117
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