STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLJ96721.1Nitrate/nitrite transport system substrate-binding protein. (475 aa)    
Predicted Functional Partners:
SLJ96734.1
Nitrate/nitrite transport system permease protein.
 
 
 0.996
SLJ96740.1
Nitrate/nitrite transport system ATP-binding protein.
 
 0.994
SLJ96803.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 
 0.958
SLJ96712.1
Response regulator receiver and ANTAR domain protein.
 
  
 0.899
SLJ96790.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.837
SLJ96799.1
Assimilatory nitrite reductase (NAD(P)H) small subunit.
 
  
 0.724
SLJ86304.1
PAS domain S-box-containing protein.
    
  0.658
SLJ94390.1
Chromate reductase.
  
 
  0.591
SLJ96716.1
NitT/TauT family transport system ATP-binding protein.
 
    
0.541
cysN
Adenylylsulfate kinase /sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.536
Your Current Organism:
Novosphingobium mathurense
NCBI taxonomy Id: 428990
Other names: CCM 7473, MTCC 9020, N. mathurense, Novosphingobium mathurense Gupta et al. 2009, Novosphingobium sp. SM117, strain SM117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.