STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLJ97417.1Hypothetical protein. (565 aa)    
Predicted Functional Partners:
SLJ99555.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.950
SLJ95233.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.941
SLJ93438.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
  0.861
SLJ94974.1
Electron transfer flavoprotein alpha subunit.
 
  0.861
SLJ87109.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.784
SLJ87076.1
Enoyl-CoA hydratase.
  
  0.780
SLK06582.1
Enoyl-CoA hydratase/carnithine racemase.
  
  0.774
SLJ93433.1
Electron transfer flavoprotein beta subunit.
 
  0.755
SLJ94970.1
Electron transfer flavoprotein beta subunit.
 
  0.755
SLJ98861.1
trans-feruloyl-CoA hydratase / vanillin synthase.
  
  0.750
Your Current Organism:
Novosphingobium mathurense
NCBI taxonomy Id: 428990
Other names: CCM 7473, MTCC 9020, N. mathurense, Novosphingobium mathurense Gupta et al. 2009, Novosphingobium sp. SM117, strain SM117
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