STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLJ99573.1Iron complex outermembrane recepter protein. (735 aa)    
Predicted Functional Partners:
SLJ99564.1
alpha-methylacyl-CoA racemase; Belongs to the CoA-transferase III family.
       0.773
SLJ86667.1
TonB-dependent Receptor Plug Domain.
  
 
  0.750
SLJ91255.1
TonB-dependent Receptor Plug Domain.
  
 
  0.747
SLK10522.1
Iron complex outermembrane recepter protein.
  
 
  0.745
SLK02417.1
Iron complex outermembrane recepter protein.
  
 
  0.732
SLJ99563.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.723
SLJ86665.1
TonB-dependent Receptor Plug Domain.
  
  
  0.704
SLJ99550.1
Ketosteroid isomerase-related protein.
       0.660
SLJ99555.1
3-hydroxyacyl-CoA dehydrogenase.
       0.660
SLK11813.1
Outer membrane receptor for ferrienterochelin and colicins.
  
 
  0.615
Your Current Organism:
Novosphingobium mathurense
NCBI taxonomy Id: 428990
Other names: CCM 7473, MTCC 9020, N. mathurense, Novosphingobium mathurense Gupta et al. 2009, Novosphingobium sp. SM117, strain SM117
Server load: low (22%) [HD]