STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLJ99967.1Chromosome partitioning protein. (411 aa)    
Predicted Functional Partners:
SLJ99959.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
 
 0.922
SLK10592.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
 
 0.854
SLK07873.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
 
 0.853
SLJ93313.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
 
 0.812
SLK07836.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
   0.725
SLJ91314.1
Chromosome partitioning protein, ParB family.
  
   0.611
SLJ85996.1
Chromosome partitioning protein, ParB family.
  
   0.610
SLJ99976.1
RepA protein.
  
     0.550
SLK11011.1
EthD domain-containing protein.
  
     0.518
SLK10202.1
Chromosome partitioning protein, ParB family.
   
   0.499
Your Current Organism:
Novosphingobium mathurense
NCBI taxonomy Id: 428990
Other names: CCM 7473, MTCC 9020, N. mathurense, Novosphingobium mathurense Gupta et al. 2009, Novosphingobium sp. SM117, strain SM117
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.